Obtained from https://www.encodeproject.org/files/ENCFF547MET/. The ENCODE blacklist includes regions of the mm10 genome that have anomalous and/or unstructured signals independent of the cell-line or experiment. Removal of ENCODE blacklist is recommended for quality measure.
data("mm10_blacklist")An object of class GRanges of length 164.
The code to prepare the .Rda file is:
## blacklisted regions were directly downloaded ## from https://www.encodeproject.org/files/ENCFF547MET/ mm10_blacklist <-
ChIPseeker::readPeakFile(file.path(path), as = "GRanges") usethis::use_data(mm10_blacklist, overwrite = TRUE)