Example results from celltype_associations_pipeline.
data("enrichment_results")An object of class list of length 1.
#### Import data ####
magma_dirs <- MAGMA.Celltyping::import_magma_files(ids = "ieu-a-298")
ctd <- ewceData::ctd()
enrichment_results <- MAGMA.Celltyping::celltype_associations_pipeline(
magma_dirs = magma_dirs,
ctd = ctd,
ctd_species = "mouse",
ctd_name = "Zeisel2015",
run_linear = TRUE,
run_top10 = TRUE,
run_conditional = TRUE,
force_new = TRUE)
usethis::use_data(enrichment_results, overwrite = TRUE)