Format GWAS summary statistics

Source: R/format_sumstats_for_magma.r

Check that sumstats has correct columns and that they are in the correct order for MAGMA and LDSC.

format_sumstats_for_magma(path)

Arguments

path

Filepath for the summary statistics file to be formatted.

Value

col_headers The new column headers for the sumstats file

Examples

if (FALSE) { # \dontrun{
path <- MAGMA.Celltyping::get_example_gwas()
new_path <- MAGMA.Celltyping:::format.sumstats.for.magma(path)
} # }