Extract embeddings — extract_embeddings • phenomix

Extract embeddings from various object types.

extract_embeddings(obj, reduction = NULL, verbose = TRUE)

Arguments

obj

obj	Object of class: `DimReduc` `Seurat` `Seurat`
reduction	Which reduction to extract from. Only used if `obj` is of class `Seurat`.
verbose	Print messages.

Object of class:

reduction

Which reduction to extract from. Only used if obj is of class Seurat.

verbose

Print messages.