Run variancePartition

Run fitExtractVarPartModel to evaluate the effect of each metadata variable on your data.

run_variancePartition(
  obj,
  metadata = NULL,
  nCores = NULL,
  form = NULL,
  is_opengwas = FALSE,
  show_plot = TRUE,
  ...
)

Arguments

obj	Matrix or Seurat object to run fitExtractVarPartModel on.
metadata	data.frame containing metadata to use in form. If obj is a Seurat object, this can be left NULL and metadata will be extracted automatically.
nCores	Number of cores to use in parallel.
is_opengwas	Whether the data comes from OpenGWAS. If TRUE, a predefined formula and metadata processing procedure will be used.
...	Additional arguments passed to fitExtractVarPartModel.