All functions

call_peaks()

Call peaks

condense_granges()

Condense GRanges

construct_searches()

Construct searches

dt_to_granges()

Convert data.table to GRanges object

get_genome()

Get genome

import_peaks()

Import peaks

liftover_grlist()

Liftover peak list

peaks_metadata_annotationhub

Metadata for epigenomic peaks: AnnotationHub

peaks_metadata_encode()

Get ENCODE peaks metadata

peaks_metadata_roadmap

Metadata for epigenomic peaks: ROADMAP

search_annotationhub()

Search metadata: AnnotationHub

search_encode()

Search metadata: ENCODE

search_roadmap()

Search metadata: ENCODE

translate_genome()

Translate genome