Package index • PeakyFinders

All functions
`bam_to()`	Convert a BAM file
`bed_to()`	Convert a BED file
`call_peaks()`	Call peaks
`condense_granges()`	Condense GRanges
`construct_searches()`	Construct searches
`create_trackhub()`	Create TrackHub
`dt_to_granges()`	Convert data.table to GRanges object
`example_bam()`	Example BAM files
`example_bg_bw()`	Example bedGraph/bigWig files
`filter_chrom()`	Filter chromosomes
`find_links()`	Find links
`get_genome()`	Get genome
`import_peaks()`	Import peaks
`liftover_grlist()`	Liftover peak list
`merge_bam()`	Merge BAM files
`peaks_metadata_annotationhub`	Metadata for epigenomic peaks: AnnotationHub
`peaks_metadata_encode()`	Get ENCODE peaks metadata
`peaks_metadata_roadmap`	Metadata for epigenomic peaks: ROADMAP
`pooled_peaks()`	Pooled peaks
`search_annotationhub()`	Search metadata: AnnotationHub
`search_encode()`	Search metadata: ENCODE
`search_roadmap()`	Search metadata: ENCODE
`translate_genome()`	Translate genome

Reference