R/generate_sce.R
generate_sce.RdGenerate a SingleCellExperiment with a sparse matrix and a one-row dataframe containing metadata for the sample.
generate_sce(mat, metadata)a sparse feature-barcode matrix
a single row dataframe with sample metadata
sce a SingleCellExperiment object annotated with sample metadata
Other annotation functions:
.preprocess_seurat_object(),
annotate_celltype_metrics(),
annotate_integrated_sce(),
annotate_merged_sce(),
annotate_sce(),
annotate_sce_cells(),
annotate_sce_genes(),
filter_sce(),
find_cells(),
find_singlets(),
map_ensembl_gene_id(),
merge_sce(),
read_metadata(),
report_celltype_metrics(),
report_celltype_model(),
report_merged_sce(),
report_qc_sce(),
run_doubletfinder(),
sce_to_seu()