Generate a report for a celltype proportion analysis — report_celltype_model • scFlow

Generate a report for a celltype proportion analysis

report_celltype_model(
  results,
  report_folder_path = getwd(),
  report_file = "celltype_model_report_scflow"
)

Arguments

results: The results object generated by model_celltype_freqs
report_folder_path: folder path to save the report
report_file: filename for report (without an extension)

See also

Other annotation functions: .preprocess_seurat_object(), annotate_celltype_metrics(), annotate_integrated_sce(), annotate_merged_sce(), annotate_sce(), annotate_sce_cells(), annotate_sce_genes(), filter_sce(), find_cells(), find_singlets(), generate_sce(), map_ensembl_gene_id(), merge_sce(), read_metadata(), report_celltype_metrics(), report_merged_sce(), report_qc_sce(), run_doubletfinder(), sce_to_seu()