New features

  • Replace subfunctions with scKirby funcs where possible.
  • New func: run_gpt
    • Alternative approach to characterising each cluster (instead of TF-IDF. Asks chatGPT to summarise the cluster.
  • Soft-deprecate seurat_pipeline and move to scKirby::process_seurat.
    • Provide shallow wrapper in the meantime.

New features

  • Implemented rworkflows.
  • Added a NEWS.md file to track changes to the package.