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Plot motif-enrichment for all experiments

Source: R/plot_enrichment_overall.R
plot_enrichment_overall.Rd

Visualises the result from get_df_enrichment for a single motif by producing a plotly bar plot with the motif enrichment comparisons for all the comparison dataset pair.

Usage

plot_enrichment_overall(
  enrichment_df,
  motif_i,
  label_colours,
  reference_label,
  html_tags = TRUE
)

Arguments

enrichment_df

A data frame containing the motif enrichment results, produced using get_df_enrichment.

motif_i

The index of the motif to plot.

label_colours

A vector with colours (valid names or hex codes) to use for "No" and "Yes" bar segments.

reference_label

The label of the reference experiment.

html_tags

Logical. If TRUE, returns the plot as a tagList object.

Value

A list of plotly objects with the peak motif enrichment data. If html_tags is TRUE, the function returns a list of tagList objects instead. The two plots in the list are named as follows:

$count_plt

y-axis represents the number of peaks.

$perc_plt

y-axis represents the percentage of peaks.

See also

Other plot functions: plot_enrichment_individual(), plot_motif_comparison()