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Produce heat maps of motif similarity matrices

Source: R/plot_motif_comparison.R
plot_motif_comparison.Rd

Produce heat maps of motif similarity matrices

Usage

plot_motif_comparison(
  comparison_matrices,
  exp_labels,
  height = NULL,
  width = NULL,
  html_tags = TRUE
)

Arguments

comparison_matrices

Output from compare_motifs for one comparison pair (Four matrices).

exp_labels

Labels for the reference and comparison experiments respectively.

width, height

The width and height of the output htmlwidget, or the output file if exporting to png/pdf/etc. Presumed to be in pixels, but if a plotly internal function decides it's in other units you may end up with a huge file! Default is 800x500 when exporting to a file, and 100 as a htmlwidget.

html_tags

Logical. If TRUE, returns the plot as a tagList object.

Value

A list of individual heat maps for the four matrices. If html_tags is TRUE, the output will be wrapped in HTML tags.

See also

Other plot functions: plot_enrichment_individual(), plot_enrichment_overall()