All functions

aggregate_mapped_genes()

Aggregate/expand a gene matrix by gene mappings

all_genes()

Get all genes

all_species()

All species

convert_orthologs()

Map genes from one species to another

create_background()

Create gene background

exp_mouse

Gene expression data: mouse

exp_mouse_enst

Transcript expression data: mouse

format_species()

Format species names

get_silhouettes()

Get silhouettes

gprofiler_namespace

gconvert namespaces

gprofiler_orgs

Reference organisms

infer_species()

Infer species from gene names

map_genes()

Map genes

map_orthologs()

Map orthologs

map_species()

Standardise species names

orthogene orthogene-package

orthogene: Interspecies gene mapping

plot_orthotree()

Create a phylogenetic tree of shared orthologs

prepare_tree()

Prepare a phylogenetic tree

report_orthologs()

Report orthologs